% This scrip summarizes all plots that could be generated for C57 (R)-CPP
% dataset
%% Plot MI_pvalue CDFs

C57_CPP_cdf_plot_MI_pvalues(Placeness_MetaData);

%% Plot PVcorr CDFs

C57_CPP_cdf_plot_pv(Data_Summary);
 
%% Plot RMcorr CDFs

C57_CPP_cdf_plot_rm(Data_Summary);

%% Plot ERcorr vs deltaT graph

[F1, F11, F2] = C57_CPP_Cross_Day_ER_DeltaT(XDay_ER_Summary);

%% plot PVcorr vs deltaT graph

[F1, F11, F2] = C57_CPP_Cross_Day_PV_DeltaT(XDay_PV_Summary);

%% plot RMcorr vs deltaT graph

[F1, F11, F2] = C57_CPP_Cross_Day_RM_DeltaT(XDay_RM_Summary);

%% plot ER distribution

C57_CPP_Event_Rate_Dist_Plot(Data_Summary);

%% plot bar graph for cell recurring probability

C57_CPP_Plot_Cell_Recurring_Probability_Bar_Graph(Data_Summary);

%% plot bar graph for mean event amplitude

C57_CPP_Plot_Event_Amp_Bar_Graph(Data_Summary);

%% plot bar graph for mean event rate

C57_CPP_Plot_Event_Rate_Bar_Graph(Data_Summary);

%% plot bar graph for ERcorr

C57_CPP_Plot_Event_Rate_Correlation_Bar_Graph(Data_Summary);

%% plot mean ERcorr cross-day matrix

C57_CPP_Plot_Mean_XDay_ER_Matrix(XDay_ER_Matrix);

%% plot mean PVcorr cross-day matrix

C57_CPP_Plot_Mean_XDay_PV_Matrix(XDay_PV_Matrix);

%% plot mean RMcorr cross-day matrix

C57_CPP_Plot_Mean_XDay_RM_Matrix(XDay_RM_Matrix);

%% plot mobility bar graph

C57_CPP_Plot_Mobility_Bar_Graph(Data_Summary);

%% plot PV bar graph

C57_CPP_Plot_PV_Bar_Graph(Data_Summary);

%% plot RM bar graph

C57_CPP_Plot_RM_Bar_Graph(Data_Summary);

%% plot pMI distributions

C57_CPP_pMI_Dist_Plot(Placeness_MetaData);

%% plot PV distributions

C57_CPP_PV_Dist_Plot(Data_Summary);

%% plot RM distributions

C57_CPP_RM_Dist_Plot(Data_Summary);

%% plot PV CDFs for altered contexts vs same context saline

C57_CPP_saline_altcontext_pv_cdf(Data_Summary);

%% plot RM CDFs for altered contexts vs same context saline

C57_CPP_saline_altcontext_rm_cdf(Data_Summary);

%% plot number of active cells bar graph

C57_CPP_Plot_Num_Active_Cell_Bar_Graph(Data_Summary);

%% plot proportion of place cells bar graph

C57_CPP_Proportion_PlaceCell_Bar_Graph(Placeness_MetaData);

%% plot RM bar graphs for many different conditions combined

C57_CPP_combined_RM_Bar_Graph(Data_Summary);
 
%% plot PV bar graphs for many different conditions combined

C57_CPP_combined_PV_Bar_Graph(Data_Summary);
